https://integralu19.org/dokuwiki/ 2026-04-06T21:34:12+00:00 https://integralu19.org/dokuwiki/ https://integralu19.org/dokuwiki/lib/exe/fetch.php?media=wiki:dokuwiki.svg text/html 2026-01-23T21:20:37+00:00 Anonymous (anonymous@undisclosed.example.com) https://integralu19.org/dokuwiki/doku.php?id=integrarray_qc_guidelines&rev=1769203237&do=diff Integrarray QC Guidelines – November 25, 2025 1. Genotype Calling Genotypes were called for many samples at the Center for Inherited Disease Research (CIDR). The genotyping platform used was the Global Screening Plus Custom Array (here called the GSA array but also referenced as product by BPM Amos_Custom_20032937X382854_A1, genome build GRCh38/hg38), with the calling algorithm GenomeStudio version 2011.1, Genotyping Module version 1.9.4, GenTrain Version 1.0. 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